BioEdit is a mouse-driven, easy-to-use sequence alignment editor and sequence analysis program designed and written by a graduate student who knows how frustrating and time consuming it can be to rely upon word-processors and command-line programs for sequence manipulation
Archive for September, 2009
NoteExpress – scientific information manager
On September - 11 - 2009
NoteExpress is a perfect assistant and information manager for researchers, scholars, students, and librarians. NoteExpress is designed to help you organize research notes and bibliographic references, generate bibliographies automatically, search and capture bibliographic data from Internet with efficiency and ease
FastPCR – an integrated tool for PCR primers design
On September - 10 - 2009
The FastPCR software is an integrated tools environment that provides comprehensive facilities for designing any kind of PCR primers for standard, long distance, inverse, real-time PCR (LUX and self-reporting), multiplex PCR, group-specific PCR (common primers for given N target sequences), unique PCR (design of specific (unique) PCR primers for each sequence); single primer PCR (design of PCR primers from close located inverted repeat), automatically detecting SSR loci and direct PCR primer design, amino acid sequence degenerate PCR and more. The software consists of a data editor; build-in commands for probe/primers design and build automation tools
MAExplorer – MicroArray Explorer
On September - 7 - 2009
The Microarray Explorer (MAExplorer) is a Java-based data-mining facility for microarray databases. It may be freely downloaded and run as a stand-alone application on your computer. The exploratory data analysis environment provides tools for the data-mining of quantitative expression profiles across multiple microarrays
Ondex – data integration platform
On September - 3 - 2009
Gathering and managing data from diverse and heterogeneous datasets is central to many systems approaches to biology. Systems biologists need to easily identify and gather the information they require and then integrate and analysis the experimental and reference data sets which can come from myriad databases with a wide variety of formats and access methods. Continue reading →
Avogadro – advanced molecular editor
On September - 2 - 2009
Avogadro is a new, open source molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.
